| Common Name | Lower Subbasin | Upper Subbasin |
|---|---|---|
| CYPRINIDAE (MINNOWS) | ||
| Largescale stoneroller | 44 | 53 |
| Central stoneroller | 44 | 58 |
| Goldfish | 1 | 0 |
| Grass carp | 1 | 0 |
| Whitetail shiner | 31 | 20 |
| Blacktail shiner | 43 | 0 |
| Common carp | 3 | 4 |
| Ozark chub | 8 | 9 |
| Cypress minnow | 1 | 0 |
| Mississippi silvery minnow | 37 | 0 |
| Striped shiner | 23 | 27 |
| Bleeding shiner | 30 | 73 |
| E. redfin shiner | 27 | 2 |
| Ribbon shiner | 9 | 0 |
| Hornyhead chub | 5 | 51 |
| Golden shiner | 34 | 7 |
| Bigeye chub | 22 | 9 |
| Pallid shiner | 2 | 0 |
| Emerald shiner | 24 | 0 |
| Bigeye shiner | 34 | 11 |
| Wedgespot shiner | 9 | 18 |
| Taillight shiner | 10 | 0 |
| Ozark minnow | 18 | 58 |
| Ozark shiner | 0 | 4 |
| Rosyface shiner | 16 | 18 |
| Sabine shiner | 14 | 0 |
| Telescope shiner | 23 | 36 |
| Weed shiner | 30 | 0 |
| Mimic shiner | 21 | 0 |
| Pugnose minnow | 22 | 0 |
| S. redbelly dace | 1 | 40 |
| Bluntnose minnow | 47 | 22 |
| Fathead minnow | 1 | 0 |
| E. slim minnow | 13 | 0 |
| Bullhead minnow | 27 | 2 |
| Creek chub | 24 | 31 |
| ICTALURIDAE (CATFISHES) | ||
| Black bullhead | 15 | 2 |
| Yellow bullhead | 21 | 22 |
| Channel catfish | 10 | 2 |
| Ozark madtom | 9 | 29 |
| Mountain madtom | 5 | 0 |
| Tadpole madtom | 7 | 0 |
| Brindled madtom | 21 | 2 |
| Freckled madtom | 15 | 4 |
| Flathead catfish | 4 | 0 |
| PERCIDAE (PERCHES) | ||
| Western sand darter | 10 | 0 |
| Scaly sand darter | 20 | 0 |
| Crystal darter | 12 | 0 |
| Mud darter | 8 | 0 |
| Greenside darter | 33 | 11 |
| Brook darter | 11 | 42 |
| Rainbow darter | 29 | 69 |
| Bluntnose darter | 23 | 0 |
| Barred fantail darter | 7 | 51 |
| Swamp darter | 8 | 0 |
| Striped fantail darter | 4 | 0 |
| Slough darter | 21 | 0 |
| Harlequin darter | 16 | 0 |
| Johnny darter | 3 | 0 |
| Goldstripe darter | 1 | 0 |
| Cypress darter | 32 | 0 |
| Speckled darter | 36 | 2 |
| Current River darter | 3 | 0 |
| Banded darter | 16 | 9 |
| Ohio logperch | 24 | 9 |
| Ozark logperch | 8 | 0 |
| Gilt darter | 14 | 4 |
| Blackside darter | 20 | 0 |
| Longnose darter | 1 | 0 |
| Dusky darter | 26 | 0 |
| River darter | 1 | 0 |
| Stargazing darter | 4 | 0 |
| Saddleback darter | 19 | 0 |
| Sauger | 2 | 0 |
| Walleye | 3 | 2 |
| CATOSTOMIDAE (SUCKERS) | ||
| River carpsucker | 3 | 0 |
| Blue sucker | 1 | 0 |
| Creek chubsucker | 23 | 20 |
| N. hogsucker | 30 | 36 |
| Smallmouth buffalo | 5 | 0 |
| Bigmouth buffalo | 2 | 0 |
| Black buffalo | 3 | 0 |
| Spotted sucker | 11 | 0 |
| Silver redhorse | 2 | 0 |
| River redhorse | 8 | 0 |
| Black redhorse | 30 | 11 |
| Golden redhorse | 26 | 4 |
| Shorthead redhorse | 3 | 0 |
| CENTRARCHIDAE (SUNFISHES) | ||
| Shadow bass | 14 | 24 |
| Flier | 2 | 0 |
| Banded pygmy sunfish | 21 | 0 |
| Green sunfish | 74 | 42 |
| Warmouth | 42 | 7 |
| Orangespotted sunfish | 14 | 0 |
| Blugill | 56 | 22 |
| Dollar sunfish | 4 | 0 |
| Longear sunfish | 71 | 51 |
| Redear sunfish | 11 | 2 |
| Red spotted sunfish | 25 | 16 |
| Bantam sunfish | 1 | 0 |
| Smallmouth bass | 19 | 42 |
| Spotted bass | 40 | 4 |
| Largemouth | 46 | 11 |
| White crappie | 22 | 2 |
| Black crappie | 12 | 0 |
| CYPRINODONTIDAE (KILLFISHES) | ||
| Northern studfish | 23 | 60 |
| Starhead topminnow | 7 | 0 |
| Blackstripe topminnow | 5 | 0 |
| Blackspotted topminnow | 80 | 51 |
| PETROMYZONTIDAE (LAMPREYS) | ||
| Chestnut lamprey | 1 | 2 |
| American brook lamprey | 1 | 0 |
| Least brook lamprey | 0 | 9 |
| LEPISOSTEIDAE (GARS) | ||
| Spotted gar | 7 | 0 |
| Longnose gar | 11 | 2 |
| CLUPEIDAE (HERRINGS) | ||
| Gizzard shad | 24 | 4 |
| MORONIDAE (SEA BASSES) | ||
| White bass | 2 | 0 |
| Striped bass | 1 | 0 |
| COTTIDAE (SCULPINS) | ||
| Banded sculpin | 16 | 42 |
| Ozark sculpin | 2 | 56 |
| POECILIIDAE (LIVE BEARERS) | ||
| Mosquitofish | 69 | 0 |
| ATHERINIDAE (SILVERSIDES) | ||
| Brook silversides | 66 | 4 |
| ESOCIDAE (PIKES) | ||
| Grass pickerel | 23 | 9 |
| Chain pickerel | 3 | 7 |
| APHREDODERIDAE (PIRATE PERCHES) | ||
| Pirate perch | 24 | 0 |
| AMIIDAE (BOWFINS) | ||
| Bowfin | 4 | 0 |
| ANGUILLIDAE (EELS) | ||
| American eel | 1 | 4 |
| SCIAENIDAE (DRUMS) | ||
| Freshwater drum | 7 | 2 |
| HIODONTIDAE (MOONEYES) | ||
| Goldeye | 1 | 0 |
| Mooneye | 2 | 0 |
| POLYODONTIDAE (PADDLEFISHES) | ||
| Paddlefish | 1 | 0 |